Survival-associated eQTLs across different cancer types
We identified 22,212 eQTLs associated with patient overall survival across different cancer types at FDR < 0.05.
|
Cancer type
|
SNP ID
|
SNP position (hg19)
|
Alleles (A/a)
|
log-rank test p-value
|
Sample size
|
Median survival time AA
|
Median survival time Aa
|
Median survival time aa
|
|
|---|---|---|---|---|---|---|---|---|---|
| KIRP | rs34586673 | chr10:26951977 | C/CAG | 6.82E-5 | 213 | 17.12 | 14.1 | 15.5 | KM Plot |
| KIRP | rs34588114 | chr6:28080628 | C/A | 1.99E-7 | 213 | 16.43 | 16.43 | 9.77 | KM Plot |
| KIRP | rs34602454 | chr9:139374457 | A/C | 0.000445 | 204 | 13.95 | 14.85 | 30.1 | KM Plot |
| KIRP | rs34622023 | chr6:26362119 | A/T | 3.08E-7 | 214 | 16.5 | 13.17 | 9.77 | KM Plot |
| KIRP | rs34657340 | chr10:63385565 | C/T | 0 | 213 | 18.03 | 9 | 1.17 | KM Plot |
| KIRP | rs34657772 | chr10:70651353 | T/C | 6.91E-9 | 214 | 15.07 | 17 | 10.6 | KM Plot |
| KIRP | rs34662244 | chr6:28073881 | G/A | 2.69E-7 | 211 | 15.88 | 15.02 | 9.77 | KM Plot |
| KIRP | rs34700788 | chr3:100035670 | T/C | 4.66E-5 | 211 | 16.45 | 17.8 | 4.67 | KM Plot |
| KIRP | rs34706883 | chr6:27805255 | A/C | 1.98E-7 | 214 | 16.47 | 12.8 | 9.77 | KM Plot |
| KIRP | rs34707685 | chr10:70733935 | C/T | 8.57E-9 | 213 | 14.87 | 18.03 | 9.77 | KM Plot |
| KIRP | rs34718920 | chr6:27783941 | C/T | 1.98E-7 | 214 | 16.5 | 12 | 9.77 | KM Plot |
| KIRP | rs34734031 | chr16:74467307 | C/T | 0.000571 | 211 | 14.1 | 19.9 | 13.1 | KM Plot |
| KIRP | rs34761771 | chr10:70676513 | C/T | 8.58E-9 | 213 | 14.85 | 18.77 | 9.77 | KM Plot |
| KIRP | rs34762726 | chr3:49689210 | G/A | 0.000534 | 214 | 14.13 | 16.97 | 19.53 | KM Plot |
| KIRP | rs34765154 | chr6:28130450 | G/A | 2.34E-7 | 212 | 16.43 | 15.02 | 9.77 | KM Plot |